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Identification and validation of PDGF transcriptional targets by microarray-coupled gene-trap mutagenesis - Supplemental Materials.

Chen, Weisheng V and Delrow, Jeffrey and Corrin, Philip D and Frazier, Jason P and Soriano, Philippe (2004) Identification and validation of PDGF transcriptional targets by microarray-coupled gene-trap mutagenesis - Supplemental Materials. Nature genetics, 36 (3). pp. 304-12. ISSN 1061-4036

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Abstract

We developed a versatile, high-throughput genetic screening strategy by coupling gene mutagenesis and expression profiling technologies. Using a retroviral gene-trap vector optimized for efficient mutagenesis and cloning, we randomly disrupted genes in mouse embryonic stem (ES) cells and amplified them to construct a cDNA microarray. With this gene-trap array, we show that transcriptional target genes of platelet-derived growth factor (PDGF) can be efficiently and reliably identified in physiologically relevant cells and are immediately accessible to genetic studies to determine their in vivo roles and relative contributions to PDGF-regulated developmental processes. The same platform can be used to search for genes of specific biological relevance in a broad array of experimental settings, providing a fast track from gene identification to functional validation.

Item Type: Article
DOI: 10.1038/ng1306
PubMed ID: 14981515
Keywords or MeSH Headings: Animals; Base Sequence; Cells, Cultured; Cloning, Molecular; Gene Expression Profiling; Genetic Vectors; Mice; Mutagenesis; Platelet-Derived Growth Factor/genetics; Retroviridae/genetics; Stem Cells/metabolism;
Depositing User: Library Staff
Date Deposited: 24 Oct 2011 19:41
Last Modified: 28 Aug 2012 21:50
URI: http://authors.fhcrc.org/id/eprint/506

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