Items where Subject is "Transcription factors"

Article or Abstract

Ayer, D E and Eisenman, R N (1993) A switch from Myc:Max to Mad:Max heterocomplexes accompanies monocyte/macrophage differentiation. Genes & development, 7 (11). pp. 2110-2119. ISSN 0890-9369

Ayer, D E and Laherty, C D and Lawrence, Q A and Armstrong, A P and Eisenman, R N (1996) Mad proteins contain a dominant transcription repression domain. Molecular and cellular biology, 16 (10). pp. 5772-5781. ISSN 0270-7306

Ayer, D E and Lawrence, Q A and Eisenman, R N (1995) Mad-Max transcriptional repression is mediated by ternary complex formation with mammalian homologs of yeast repressor Sin3. Cell, 80 (5). pp. 767-776. ISSN 0092-8674

Bigler, J and Eisenman, R N (1994) Isolation of a thyroid hormone-responsive gene by immunoprecipitation of thyroid hormone receptor-DNA complexes. Molecular and cellular biology, 14 (11). pp. 7621-7632. ISSN 0270-7306

Bigler, J and Eisenman, R N (1995) Novel location and function of a thyroid hormone response element. The EMBO journal, 14 (22). pp. 5710-5723. ISSN 0261-4189

Blackwell, T K and Huang, J and Ma, A and Kretzner, L and Alt, F W and Eisenman, R N and Weintraub, H (1993) Binding of myc proteins to canonical and noncanonical DNA sequences. Molecular and cellular biology, 13 (9). pp. 5216-5224. ISSN 0270-7306

Blackwood, E M and Eisenman, R N (1991) Max: a helix-loop-helix zipper protein that forms a sequence-specific DNA-binding complex with Myc. Science (New York, N.Y.), 251 (4998). pp. 1211-1217. ISSN 0036-8075

Blackwood, E M and Lüscher, B and Eisenman, R N (1992) Myc and Max associate in vivo. Genes & development, 6 (1). pp. 71-80. ISSN 0890-9369

Brubaker, K and Cowley, S M and Huang, K and Loo, L and Yochum, G S and Ayer, D E and Eisenman, R N and Radhakrishnan, I (2000) Solution structure of the interacting domains of the Mad-Sin3 complex: implications for recruitment of a chromatin-modifying complex. Cell, 103 (4). pp. 655-665. ISSN 0092-8674

Chen, Hung-Ta and Warfield, Linda and Hahn, Steven (2007) The positions of TFIIF and TFIIE in the RNA polymerase II transcription preinitiation complex. Nature structural & molecular biology, 14 (8). pp. 696-703. ISSN 1545-9993

Cleveland, J L and Huleihel, M and Bressler, P and Siebenlist, U and Akiyama, L and Eisenman, R N and Rapp, U R (1988) Negative regulation of c-myc transcription involves myc family proteins. Oncogene research, 3 (4). pp. 357-375. ISSN 0890-6467

Conant, Clarke R and Van Gilst, Marc R and Weitzel, Stephen E and Rees, William A and von Hippel, Peter H (2005) A quantitative description of the binding states and in vitro function of antitermination protein N of bacteriophage lambda. Journal of molecular biology, 348 (5). pp. 1039-1057. ISSN 0022-2836

Cowley, Shaun M and Iritani, Brian M and Mendrysa, Susan M and Xu, Tina and Cheng, Pei Feng and Yada, Jason and Liggitt, H Denny and Eisenman, Robert N (2005) The mSin3A chromatin-modifying complex is essential for embryogenesis and T-cell development. Molecular and cellular biology, 25 (16). pp. 6990-7004. ISSN 0270-7306

Cowley, Shaun M and Kang, Richard S and Frangioni, John V and Yada, Jason J and DeGrand, Alec M and Radhakrishnan, Ishwar and Eisenman, Robert N (2004) Functional analysis of the Mad1-mSin3A repressor-corepressor interaction reveals determinants of specificity, affinity, and transcriptional response. Molecular and cellular biology, 24 (7). pp. 2698-2709. ISSN 0270-7306

Edelhoff, S and Ayer, D E and Zervos, A S and Steingrímsson, E and Jenkins, N A and Copeland, N G and Eisenman, R N and Brent, R and Disteche, C M (1994) Mapping of two genes encoding members of a distinct subfamily of MAX interacting proteins: MAD to human chromosome 2 and mouse chromosome 6, and MXI1 to human chromosome 10 and mouse chromosome 19. Oncogene, 9 (2). pp. 665-668. ISSN 0950-9232

Eisenman, R N (2001) Deconstructing myc. Genes & development, 15 (16). pp. 2023-2030. ISSN 0890-9369

Foley, K P and Eisenman, R N (1999) Two MAD tails: what the recent knockouts of Mad1 and Mxi1 tell us about the MYC/MAX/MAD network. Biochimica et biophysica acta, 1423 (3). M37-M47. ISSN 0006-3002

Gallant, P and Shiio, Y and Cheng, P F and Parkhurst, S M and Eisenman, R N (1996) Myc and Max homologs in Drosophila. Science (New York, N.Y.), 274 (5292). pp. 1523-1527. ISSN 0036-8075

Gilladoga, A D and Edelhoff, S and Blackwood, E M and Eisenman, R N and Disteche, C M (1992) Mapping of MAX to human chromosome 14 and mouse chromosome 12 by in situ hybridization. Oncogene, 7 (6). pp. 1249-1251. ISSN 0950-9232

Grandori, C and Cowley, S M and James, L P and Eisenman, R N (2000) The Myc/Max/Mad network and the transcriptional control of cell behavior. Annual review of cell and developmental biology, 16. pp. 653-699. ISSN 1081-0706

Grandori, C and Mac, J and Siëbelt, F and Ayer, D E and Eisenman, R N (1996) Myc-Max heterodimers activate a DEAD box gene and interact with multiple E box-related sites in vivo. The EMBO journal, 15 (16). pp. 4344-4357. ISSN 0261-4189

Heinzel, T and Lavinsky, R M and Mullen, T M and Söderstrom, M and Laherty, C D and Torchia, J and Yang, W M and Brard, G and Ngo, S D and Davie, J R and Seto, E and Eisenman, R N and Rose, D W and Glass, C K and Rosenfeld, M G (1997) A complex containing N-CoR, mSin3 and histone deacetylase mediates transcriptional repression. Nature, 387 (6628). pp. 43-48. ISSN 0028-0836

Hurlin, P J and Foley, K P and Ayer, D E and Eisenman, R N and Hanahan, D and Arbeit, J M (1995) Regulation of Myc and Mad during epidermal differentiation and HPV-associated tumorigenesis. Oncogene, 11 (12). pp. 2487-2501. ISSN 0950-9232

Hurlin, P J and Quéva, C and Eisenman, R N (1997) Mnt, a novel Max-interacting protein is coexpressed with Myc in proliferating cells and mediates repression at Myc binding sites. Genes & development, 11 (1). pp. 44-58. ISSN 0890-9369

Hurlin, P J and Quéva, C and Koskinen, P J and Steingrímsson, E and Ayer, D E and Copeland, N G and Jenkins, N A and Eisenman, R N (1995) Mad3 and Mad4: novel Max-interacting transcriptional repressors that suppress c-myc dependent transformation and are expressed during neural and epidermal differentiation. The EMBO journal, 14 (22). pp. 5646-5659. ISSN 0261-4189

Hurlin, P J and Steingrìmsson, E and Copeland, N G and Jenkins, N A and Eisenman, R N (1999) Mga, a dual-specificity transcription factor that interacts with Max and contains a T-domain DNA-binding motif. The EMBO journal, 18 (24). pp. 7019-7028. ISSN 0261-4189

Iritani, Brian M and Delrow, Jeffrey and Grandori, Carla and Gomez, Ivan and Klacking, Meredith and Carlos, Leni Sue and Eisenman, Robert N (2002) Modulation of T-lymphocyte development, growth and cell size by the Myc antagonist and transcriptional repressor Mad1. The EMBO journal, 21 (18). pp. 4820-4830. ISSN 0261-4189

James, Leonard and Eisenman, Robert N (2002) Myc and Mad bHLHZ domains possess identical DNA-binding specificities but only partially overlapping functions in vivo. Proceedings of the National Academy of Sciences of the United States of America, 99 (16). pp. 10429-10434. ISSN 0027-8424

Johnston, L A and Prober, D A and Edgar, B A and Eisenman, R N and Gallant, P (1999) Drosophila myc regulates cellular growth during development. Cell, 98 (6). pp. 779-790. ISSN 0092-8674

King, M W and Blackwood, E M and Eisenman, R N (1993) Expression of two distinct homologues of Xenopus Max during early development. Cell growth & differentiation : the molecular biology journal of the American Association for Cancer Research, 4 (2). pp. 85-92. ISSN 1044-9523

Knoepfler, P S and Eisenman, R N (1999) Sin meets NuRD and other tails of repression. Cell, 99 (5). pp. 447-450. ISSN 0092-8674

Koskinen, P J and Ayer, D E and Eisenman, R N (1995) Repression of Myc-Ras cotransformation by Mad is mediated by multiple protein-protein interactions. Cell growth & differentiation : the molecular biology journal of the American Association for Cancer Research, 6 (6). pp. 623-629. ISSN 1044-9523

Koskinen, P J and Västrik, I and Mäkelä, T P and Eisenman, R N and Alitalo, K (1994) Max activity is affected by phosphorylation at two NH2-terminal sites. Cell growth & differentiation : the molecular biology journal of the American Association for Cancer Research, 5 (3). pp. 313-320. ISSN 1044-9523

Laherty, C D and Billin, A N and Lavinsky, R M and Yochum, G S and Bush, A C and Sun, J M and Mullen, T M and Davie, J R and Rose, D W and Glass, C K and Rosenfeld, M G and Ayer, D E and Eisenman, R N (1998) SAP30, a component of the mSin3 corepressor complex involved in N-CoR-mediated repression by specific transcription factors. Molecular cell, 2 (1). pp. 33-42. ISSN 1097-2765

Laherty, C D and Yang, W M and Sun, J M and Davie, J R and Seto, E and Eisenman, R N (1997) Histone deacetylases associated with the mSin3 corepressor mediate mad transcriptional repression. Cell, 89 (3). pp. 349-356. ISSN 0092-8674

Leverson, J D and Koskinen, P J and Orrico, F C and Rainio, E M and Jalkanen, K J and Dash, A B and Eisenman, R N and Ness, S A (1998) Pim-1 kinase and p100 cooperate to enhance c-Myb activity. Molecular cell, 2 (4). pp. 417-425. ISSN 1097-2765

Lindeman, G J and Harris, A W and Bath, M L and Eisenman, R N and Adams, J M (1995) Overexpressed max is not oncogenic and attenuates myc-induced lymphoproliferation and lymphomagenesis in transgenic mice. Oncogene, 10 (5). pp. 1013-7. ISSN 0950-9232

Loo, Lenora W M and Secombe, Julie and Little, John T and Carlos, Leni-Sue and Yost, Cynthia and Cheng, Pei-Feng and Flynn, Erin M and Edgar, Bruce A and Eisenman, Robert N (2005) The transcriptional repressor dMnt is a regulator of growth in Drosophila melanogaster. Molecular and cellular biology, 25 (16). pp. 7078-7091. ISSN 0270-7306

Mezquita, Pau and Parghi, Sean S and Brandvold, Kimberly A and Ruddell, Alanna (2005) Myc regulates VEGF production in B cells by stimulating initiation of VEGF mRNA translation. Oncogene, 24 (5). pp. 889-901. ISSN 0950-9232

Miller, Gail and Hahn, Steven (2006) A DNA-tethered cleavage probe reveals the path for promoter DNA in the yeast preinitiation complex. Nature structural & molecular biology, 13 (7). pp. 603-610. ISSN 1545-9993

Nan, X and Ng, H H and Johnson, C A and Laherty, C D and Turner, B M and Eisenman, R N and Bird, A (1998) Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex. Nature, 393 (6683). pp. 386-389. ISSN 0028-0836

Orian, Amir and van Steensel, Bas and Delrow, Jeffrey and Bussemaker, Harmen J and Li, Ling and Sawado, Tomoyuki and Williams, Eleanor and Loo, Lenora W M and Cowley, Shaun M and Yost, Cynthia and Pierce, Sarah and Edgar, Bruce A and Parkhurst, Susan M and Eisenman, Robert N (2003) Genomic binding by the Drosophila Myc, Max, Mad/Mnt transcription factor network. Genes & development, 17 (9). pp. 1101-1114. ISSN 0890-9369

Pierce, Sarah B and Yost, Cynthia and Britton, Jessica S and Loo, Lenora W M and Flynn, Erin M and Edgar, Bruce A and Eisenman, Robert N (2004) dMyc is required for larval growth and endoreplication in Drosophila. Development (Cambridge, England), 131 (10). pp. 2317-2327. ISSN 0950-1991

Quéva, C and Hurlin, P J and Foley, K P and Eisenman, R N (1998) Sequential expression of the MAD family of transcriptional repressors during differentiation and development. Oncogene, 16 (8). pp. 967-977. ISSN 0950-9232

Quéva, C and McArthur, G A and Iritani, B M and Eisenman, R N (2001) Targeted deletion of the S-phase-specific Myc antagonist Mad3 sensitizes neuronal and lymphoid cells to radiation-induced apoptosis. Molecular and cellular biology, 21 (3). pp. 703-712. ISSN 0270-7306

Roussel, M F and Ashmun, R A and Sherr, C J and Eisenman, R N and Ayer, D E (1996) Inhibition of cell proliferation by the Mad1 transcriptional repressor. Molecular and cellular biology, 16 (6). pp. 2796-2801. ISSN 0270-7306

Sang, Liyun and Coller, Hilary A and Roberts, James M (2008) Control of the reversibility of cellular quiescence by the transcriptional repressor HES1. Science (New York, N.Y.), 321 (5892). pp. 1095-1100. ISSN 1095-9203

Secombe, Julie and Li, Ling and Carlos, Leni and Eisenman, Robert N (2007) The Trithorax group protein Lid is a trimethyl histone H3K4 demethylase required for dMyc-induced cell growth. Genes & development, 21 (5). pp. 537-551. ISSN 0890-9369

Shiio, Yuzuru and Rose, David W and Aur, Radin and Donohoe, Sam and Aebersold, Ruedi and Eisenman, Robert N (2006) Identification and characterization of SAP25, a novel component of the mSin3 corepressor complex. Molecular and cellular biology, 26 (4). pp. 1386-1397. ISSN 0270-7306

Shiio, Yuzuru and Suh, Kwang S and Lee, Hookeun and Yuspa, Stuart H and Eisenman, Robert N and Aebersold, Ruedi (2006) Quantitative proteomic analysis of myc-induced apoptosis: a direct role for Myc induction of the mitochondrial chloride ion channel, mtCLIC/CLIC4. The Journal of biological chemistry, 281 (5). pp. 2750-2576. ISSN 0021-9258

Stirewalt, Derek L. and Choi, Yongjae Edward and Sharpless, Norman E. and Pogosova-Agadjanyan, Era L. and Cronk, Michelle R. and Yukawa, Michi and Larson, Eric B. and Wood, Brent L. and Appelbaum, Frederick R. and Radich, Jerald P. and Heimfeld, Shelly (2009) Decreased IRF8 expression found in aging hematopoietic progenitor/stem cells. Leukemia : official journal of the Leukemia Society of America, Leukemia Research Fund, U.K, 23 (2). pp. 391-393. ISSN 1476-5551

Swanson, Kurt A and Knoepfler, Paul S and Huang, Kai and Kang, Richard S and Cowley, Shaun M and Laherty, Carol D and Eisenman, Robert N and Radhakrishnan, Ishwar (2004) HBP1 and Mad1 repressors bind the Sin3 corepressor PAH2 domain with opposite helical orientations. Nature structural & molecular biology, 11 (8). pp. 738-746. ISSN 1545-9993

Taubert, Stefan and Hansen, Malene and Van Gilst, Marc R and Cooper, Samantha B and Yamamoto, Keith R (2008) The Mediator subunit MDT-15 confers metabolic adaptation to ingested material. PLoS genetics, 4 (2). e1000021. ISSN 1553-7404

Toyo-oka, Kazuhito and Bowen, Timothy J and Hirotsune, Shinji and Li, Zirong and Jain, Sonia and Ota, Sara and Escoubet-Lozach, Laure and Lozach, Laure Escoubet and Garcia-Bassets, Ivan and Bassett, Ivan Garcia and Lozach, Jean and Rosenfeld, Michael G and Glass, Christopher K and Eisenman, Robert and Ren, Bing and Hurlin, Peter and Wynshaw-Boris, Anthony (2006) Mnt-deficient mammary glands exhibit impaired involution and tumors with characteristics of myc overexpression. Cancer research, 66 (11). pp. 5565-5573. ISSN 0008-5472

Toyo-oka, Kazuhito and Hirotsune, Shinji and Gambello, Michael J and Zhou, Zi-Qiang and Olson, Lorin and Rosenfeld, Michael G and Eisenman, Robert and Hurlin, Peter and Wynshaw-Boris, Anthony (2004) Loss of the Max-interacting protein Mnt in mice results in decreased viability, defective embryonic growth and craniofacial defects: relevance to Miller-Dieker syndrome. Human molecular genetics, 13 (10). pp. 1057-1067. ISSN 0964-6906

Van Gilst, M R and Rees, W A and Das, A and von Hippel, P H (1997) Complexes of N antitermination protein of phage lambda with specific and nonspecific RNA target sites on the nascent transcript. Biochemistry, 36 (6). pp. 1514-1524. ISSN 0006-2960

Van Gilst, M R and von Hippel, P H (1997) Assembly of the N-dependent antitermination complex of phage lambda: NusA and RNA bind independently to different unfolded domains of the N protein. Journal of molecular biology, 274 (2). pp. 160-173. ISSN 0022-2836

Van Gilst, M R and von Hippel, P H (2000) Quantitative dissection of transcriptional control system: N-dependent antitermination complex of phage lambda as regulatory paradigm. Methods in enzymology, 323. pp. 1-31. ISSN 0076-6879

Vincent, Jack A and Kwong, Tracey J and Tsukiyama, Toshio (2008) ATP-dependent chromatin remodeling shapes the DNA replication landscape. Nature structural & molecular biology, 15 (5). pp. 477-484. ISSN 1545-9985

Wysocka, Joanna and Myers, Michael P and Laherty, Carol D and Eisenman, Robert N and Herr, Winship (2003) Human Sin3 deacetylase and trithorax-related Set1/Ash2 histone H3-K4 methyltransferase are tethered together selectively by the cell-proliferation factor HCF-1. Genes & development, 17 (7). pp. 896-911. ISSN 0890-9369